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- A multi-pronged approach to targeting myeloproliferative neoplasms
- A new paradigm of machine learning-based structural variant detection
- A whole lot of junk or a treasure trove of discovery?
- Advanced imaging interrogation of pathogen induced NETosis
- Analysing the metabolic interactions in brain cancer
- Atopic dermatitis causes and treatments
- Boosting the efficacy of immunotherapy in lung cancer
- Building a cell history recorder using synthetic biology for longitudinal patient monitoring
- Characterisation of malaria parasite proteins exported into infected liver cells
- Deciphering the heterogeneity of the tissue microenvironment by multiplexed 3D imaging
- Defining the mechanisms of thymic involution and regeneration
- Delineating the molecular and cellular origins of liver cancer to identify therapeutic targets
- Developing computational methods for spatial transcriptomics data
- Developing drugs to block malaria transmission
- Developing models for prevention of hereditary ovarian cancer
- Developing statistical frameworks for analysing next generation sequencing data
- Development and mechanism of action of novel antimalarials
- Development of novel RNA sequencing protocols for gene expression analysis
- Discoveries in red blood cell production and function
- Discovering epigenetic silencing mechanisms in female stem cells
- Discovery and targeting of novel regulators of transcription
- Dissecting host cell invasion by the diarrhoeal pathogen Cryptosporidium
- Dissecting mechanisms of cytokine signalling
- Doublecortin-like kinases, drug targets in cancer and neurological disorders
- Epigenetic biomarkers of tuberculosis infection
- Epigenetics – genome wide multiplexed single-cell CUT&Tag assay development
- Exploiting cell death pathways in regulatory T cells for cancer immunotherapy
- Exploiting the cell death pathway to fight Schistosomiasis
- Finding treatments for chromatin disorders of intellectual disability
- Functional epigenomics in human B cells
- How do nutrition interventions and interruption of malaria infection influence development of immunity in sub-Saharan African children?
- Human lung protective immunity to tuberculosis
- Improving therapy in glioblastoma multiforme by activating complimentary programmed cell death pathways
- Innovating novel diagnostic tools for infectious disease control
- Integrative analysis of single cell RNAseq and ATAC-seq data
- Interaction with Toxoplasma parasites and the brain
- Interactions between tumour cells and their microenvironment in non-small cell lung cancer
- Investigation of a novel cell death protein
- Malaria: going bananas for sex
- Mapping spatial variation in gene and transcript expression across tissues
- Mechanisms of Wnt secretion and transport
- Multi-modal computational investigation of single-cell communication in metastatic cancer
- Nanoparticle delivery of antibody mRNA into cells to treat liver diseases
- Naturally acquired immune response to malaria parasites
- Organoid-based discovery of new drug combinations for bowel cancer
- Organoid-based precision medicine approaches for oral cancer
- Removal of tissue contaminations from RNA-seq data
- Reversing antimalarial resistance in human malaria parasites
- Role of glycosylation in malaria parasite infection of liver cells, red blood cells and mosquitoes
- Screening for novel genetic causes of primary immunodeficiency
- Single-cell ATAC CRISPR screening – Illuminate chromatin accessibility changes in genome wide CRISPR screens
- Spatial single-cell CRISPR screening – All in one screen: Where? Who? What?
- Statistical analysis of single-cell multi-omics data
- Structural and functional analysis of epigenetic multi-protein complexes in genome regulation
- Structural basing for Wnt acylation
- Structure, dynamics and impact of extra-chromosomal DNA in cancer
- Targeted deletion of disease-causing T cells
- Targeting cell death pathways in tissue Tregs to treat inflammatory diseases
- The cellular and molecular calculation of life and death in lymphocyte regulation
- The role of hypoxia in cell death and inflammation
- The role of ribosylation in co-ordinating cell death and inflammation
- Understanding Plasmodium falciparum invasion of red blood cells
- Understanding cellular-cross talk within a tumour microenvironment
- Understanding the genetics of neutrophil maturation
- Understanding the roles of E3 ubiquitin ligases in health and disease
- Unveiling the heterogeneity of small cell lung cancer
- Using combination immunotherapy to tackle heterogeneous brain tumours
- Using intravital microscopy for immunotherapy against brain tumours
- Using nanobodies to understand malaria invasion and transmission
- Using structural biology to understand programmed cell death
- Validation and application of serological markers of previous exposure to malaria
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Kate Sutherland-Projects
Researcher:
Exploiting KEAP1 vulnerabilities to treat aggressive lung cancer
Alternations in the KEAP1-NRF2 pathway are found in a high percentage of non-small cell lung cancers and led to enhanced NRF2 activity. Critically, increased expression of NRF2 is associated with poor prognosis, highlighting the urgent need for new therapeutic strategies for this subgroup of patients.
To understand the effect of KEAP1-NRF2 pathway alternations on lung cancer, we have engineered in vivo models that faithfully mimic KEAP1-mutant human lung cancers.
Current work is focused on identifying effective treatments that target KEAP1-mutant lung cancer. To achieve this, we will utilise CRISPR/Cas9 technologies and perform high-throughput drug screening in collaboration with the National Drug Discovery Centre (NDDC).
Immune regulation in lung cancer
Immunotherapeutic approaches, such as monoclonal antibodies targeting PD-1/PD-L1 and CTLA-4 unleash the T cell response to eliminate tumour cells. While this approach has shown considerable promise in lung cancer patients, not all patients will respond to conventional T cell-based immunotherapies.
In response to this, we aim to harness the anti-tumour activity of other immune cell populations, such as Natural Killer cells and macrophages.
Identifying drivers of small cell lung cancer metastasis
Small cell lung cancer (SCLC) is the most aggressive subtype of lung cancer, with a five-year survival rate of less than 7 per cent. Critically, SCLC has a high propensity for early spread, with 50-80 per cent of patients harbouring metastatic lesions in multiple organs at the time of diagnosis.
To understand underlying mechanisms controlling metastatic dissemination, we have developed in vivo SCLC models to augment metastatic activity.
We aim to identify novel therapeutic approaches to restrict primary and metastatic disease in SCLC.
Unravelling small cell lung cancer heterogeneity
Emerging evidence suggests that small cell lung cancer (SCLC) is a heterogeneous disease that can be classified into four distinct subtypes based on the differential expression of the transcription factors ASCL1, NEUROD1, POU2F3 and YAP1. This raises interesting biological questions that could directly inform the therapeutic treatment of SCLC patients.
We aim to develop sophisticated CRISPR/Cas9 in vivo models to explore the genetic and cellular drivers of heterogeneity.